Fix iplot error lpdid #1862
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- master | |
pull_request: | |
branches: | |
- master | |
jobs: | |
test: | |
name: "Tests Core" | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: ["ubuntu-latest"] | |
python-version: ["3.9", "3.12"] | |
pytest_opts: ["--workers 4 --tests-per-worker 1"] | |
steps: | |
- name: Checkout source | |
uses: actions/checkout@v4 | |
- name: Setup python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
architecture: x64 | |
- uses: prefix-dev/[email protected] | |
with: | |
pixi-version: v0.29.0 | |
cache: true | |
- name: set numba parallel flags | |
run: | | |
echo "NUMBA_NUM_THREADS=1" >> $GITHUB_ENV | |
- name: Setup r2u | |
uses: eddelbuettel/github-actions/r2u-setup@master | |
- name: Print R version | |
run: | | |
Rscript -e 'R.version' | |
- name: Install R packages | |
run: | | |
R_LIB_PATH="${{ github.workspace }}/.pixi/envs/dev/lib/R/library" | |
mkdir -p $R_LIB_PATH | |
Rscript -e ".libPaths('$R_LIB_PATH'); install.packages(c('fixest', 'broom', 'did2s', 'wildrwolf', 'ivDiag', 'car'), lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library')" | |
Rscript -e ".libPaths('$R_LIB_PATH'); install.packages('ritest', lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library', repos = c('https://grantmcdermott.r-universe.dev'))" | |
- name: Run 'regular 'tests | |
run: | | |
pixi run tests-regular | |
# Run tests for PRs with the label "tests-extended" | |
#- name: Run tests for plots (only on PRs with the 'tests-extended' label) | |
# if: github.event_name == 'pull_request' && contains(github.event.label.name, 'tests-extended') | |
# run: pixi run tests-extended | |
# Run tests for push to master | |
#- name: Run tests for push to master | |
# if: github.event_name == 'push' && github.ref == 'refs/heads/master' | |
# run: pixi run tests-extended | |
- name: Upload to Codecov | |
uses: codecov/codecov-action@v4 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
partial: true | |
flags: core-tests | |
test_slow: | |
name: "Tests vs fixest" | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: ["ubuntu-latest"] | |
python-version: ["3.9", "3.12"] | |
pytest_opts: ["--workers 4 --tests-per-worker 1"] | |
steps: | |
- name: Checkout source | |
uses: actions/checkout@v4 | |
- name: Setup python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
architecture: x64 | |
- uses: prefix-dev/[email protected] | |
with: | |
pixi-version: v0.29.0 | |
cache: true | |
- name: set numba parallel flags | |
run: | | |
echo "NUMBA_NUM_THREADS=1" >> $GITHUB_ENV | |
- name: Setup r2u | |
uses: eddelbuettel/github-actions/r2u-setup@master | |
- name: Install R packages | |
run: | | |
R_LIB_PATH="${{ github.workspace }}/.pixi/envs/dev/lib/R/library" | |
mkdir -p $R_LIB_PATH | |
Rscript -e ".libPaths('$R_LIB_PATH'); install.packages(c('fixest', 'broom','did2s', 'wildrwolf', 'ivDiag', 'car'), lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library')" | |
Rscript -e ".libPaths('$R_LIB_PATH'); install.packages('ritest', lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library', repos = c('https://grantmcdermott.r-universe.dev'))" | |
- name: Run 'slow 'tests | |
run: | | |
pixi run tests-slow | |
#- name: Upload to Codecov | |
# uses: codecov/codecov-action@v4 | |
# with: | |
# token: ${{ secrets.CODECOV_TOKEN }} | |
# partial: true | |
# flags: tests-vs-fixest | |
build-docs: | |
name: "Build Docs" | |
runs-on: ubuntu-latest | |
needs: ["test"] | |
steps: | |
- name: Checkout source | |
uses: actions/checkout@v4 | |
- name: Setup python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.11" | |
- uses: prefix-dev/[email protected] | |
with: | |
pixi-version: v0.29.0 | |
cache: true | |
- name: Set up Quarto | |
uses: quarto-dev/quarto-actions/setup@v2 | |
- name: install tinytex | |
run: | | |
quarto install tinytex | |
- name: Compile docstrings with quartodoc | |
run: | | |
pixi run docs-build | |
- name: Render docs | |
run: | | |
pixi run docs-render | |
- name: Save docs artifact | |
uses: actions/upload-artifact@v4 | |
with: | |
name: docs-html | |
path: docs/_site | |
publish-docs: | |
name: "Publish Docs" | |
runs-on: ubuntu-latest | |
permissions: | |
contents: write | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
needs: ["build-docs", "test"] | |
if: github.ref == 'refs/heads/master' | |
steps: | |
- name: Download docs artifact | |
uses: actions/download-artifact@v4 | |
with: | |
name: docs-html | |
path: docs/_site | |
- name: Publish docs to GitHub Pages | |
uses: peaceiris/actions-gh-pages@v3 | |
with: | |
github_token: ${{ secrets.GITHUB_TOKEN }} | |
publish_dir: docs/_site |