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obophenotype

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  1. human-phenotype-ontology human-phenotype-ontology Public

    Ontology for the description of human clinical features

    Makefile 295 51

  2. cell-ontology cell-ontology Public

    An ontology of cell types

    Makefile 151 49

  3. uberon uberon Public

    An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

    Emacs Lisp 135 30

  4. upheno upheno Public

    The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

    Makefile 78 17

  5. bio-attribute-ontology bio-attribute-ontology Public

    source files for OBA (Ontology of Biological Attributes)

    Jupyter Notebook 27 11

  6. ncbitaxon ncbitaxon Public

    Build for NCBITaxon

    Python 27 7

Repositories

Showing 10 of 63 repositories
  • cell-ontology Public

    An ontology of cell types

    obophenotype/cell-ontology’s past year of commit activity
    Makefile 151 CC-BY-4.0 49 275 20 Updated Dec 20, 2024
  • uberon Public

    An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology

    obophenotype/uberon’s past year of commit activity
    Emacs Lisp 135 30 303 (2 issues need help) 19 Updated Dec 19, 2024
  • provisional_cell_ontology Public

    Draft cell type definitions from data - candidates for inclusion in CL

    obophenotype/provisional_cell_ontology’s past year of commit activity
    Makefile 12 CC-BY-4.0 1 19 0 Updated Dec 19, 2024
  • human-phenotype-ontology Public

    Ontology for the description of human clinical features

    obophenotype/human-phenotype-ontology’s past year of commit activity
    Makefile 295 51 232 7 Updated Dec 19, 2024
  • upheno-dev Public

    Framework for the automated construction of uPheno 2.0

    obophenotype/upheno-dev’s past year of commit activity
    Jupyter Notebook 5 MIT 5 33 7 Updated Dec 18, 2024
  • upheno Public

    The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.

    obophenotype/upheno’s past year of commit activity
    Makefile 78 CC0-1.0 17 246 (5 issues need help) 16 Updated Dec 12, 2024
  • hpo-translations Public

    This repo will contain the Human Phenotype Ontology language profiles

    obophenotype/hpo-translations’s past year of commit activity
    Makefile 4 2 9 1 Updated Dec 12, 2024
  • developmental-stage-ontologies Public

    Source files for various species-specific stage ontologies

    obophenotype/developmental-stage-ontologies’s past year of commit activity
    Makefile 10 5 53 3 Updated Dec 11, 2024
  • bio-attribute-ontology Public

    source files for OBA (Ontology of Biological Attributes)

    obophenotype/bio-attribute-ontology’s past year of commit activity
    Jupyter Notebook 27 CC0-1.0 11 79 7 Updated Nov 26, 2024
  • ncbitaxon Public

    Build for NCBITaxon

    obophenotype/ncbitaxon’s past year of commit activity
    Python 27 BSD-3-Clause 7 28 1 Updated Nov 25, 2024
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