Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

chore(pip): avoid response buffering #873

Open
wants to merge 6 commits into
base: main
Choose a base branch
from

Conversation

asaf92-legit
Copy link

@asaf92-legit asaf92-legit commented Oct 22, 2023

PyPi dependencies contain large .whl files that are buffered in full into memory, only to resolve a dependency tree. This can lead to OOM errors in some environments. There are popular packages that are hundreds of megabytes in size.

In this change, the response is streamed to a temporary file, and the temporary file content is streamed to the ZipArchive, reducing the peak memory. Caching is also now done at a cache-key level, rather than an HTTP response level, as caching HTTP response streams is not possible.

I'm not sure whether the dependencies cache should also be limited by the same env-var that is used for the HTTP responses cache, as the dependencies cache is much smaller. In this PR the cache size is the same in both.

This solves #731

@asaf92-legit asaf92-legit marked this pull request as ready for review October 23, 2023 07:15
@asaf92-legit asaf92-legit requested a review from a team as a code owner October 23, 2023 07:15
@asaf92-legit asaf92-legit requested a review from Omotola October 23, 2023 07:15
@asaf92-legit
Copy link
Author

@asaf92-legit please read the following Contributor License Agreement(CLA). If you agree with the CLA, please reply with the following information.

@microsoft-github-policy-service agree [company="{your company}"]

Options:

  • (default - no company specified) I have sole ownership of intellectual property rights to my Submissions and I am not making Submissions in the course of work for my employer.
@microsoft-github-policy-service agree
  • (when company given) I am making Submissions in the course of work for my employer (or my employer has intellectual property rights in my Submissions by contract or applicable law). I have permission from my employer to make Submissions and enter into this Agreement on behalf of my employer. By signing below, the defined term “You” includes me and my employer.
@microsoft-github-policy-service agree company="Microsoft"

Contributor License Agreement

Contribution License Agreement

This Contribution License Agreement (“Agreement”) is agreed to by the party signing below (“You”), and conveys certain license rights to Microsoft Corporation and its affiliates (“Microsoft”) for Your contributions to Microsoft open source projects. This Agreement is effective as of the latest signature date below.

  1. Definitions.
    “Code” means the computer software code, whether in human-readable or machine-executable form,
    that is delivered by You to Microsoft under this Agreement.
    “Project” means any of the projects owned or managed by Microsoft and offered under a license
    approved by the Open Source Initiative (www.opensource.org).
    “Submit” is the act of uploading, submitting, transmitting, or distributing code or other content to any
    Project, including but not limited to communication on electronic mailing lists, source code control
    systems, and issue tracking systems that are managed by, or on behalf of, the Project for the purpose of
    discussing and improving that Project, but excluding communication that is conspicuously marked or
    otherwise designated in writing by You as “Not a Submission.”
    “Submission” means the Code and any other copyrightable material Submitted by You, including any
    associated comments and documentation.
  2. Your Submission. You must agree to the terms of this Agreement before making a Submission to any
    Project. This Agreement covers any and all Submissions that You, now or in the future (except as
    described in Section 4 below), Submit to any Project.
  3. Originality of Work. You represent that each of Your Submissions is entirely Your original work.
    Should You wish to Submit materials that are not Your original work, You may Submit them separately
    to the Project if You (a) retain all copyright and license information that was in the materials as You
    received them, (b) in the description accompanying Your Submission, include the phrase “Submission
    containing materials of a third party:” followed by the names of the third party and any licenses or other
    restrictions of which You are aware, and (c) follow any other instructions in the Project’s written
    guidelines concerning Submissions.
  4. Your Employer. References to “employer” in this Agreement include Your employer or anyone else
    for whom You are acting in making Your Submission, e.g. as a contractor, vendor, or agent. If Your
    Submission is made in the course of Your work for an employer or Your employer has intellectual
    property rights in Your Submission by contract or applicable law, You must secure permission from Your
    employer to make the Submission before signing this Agreement. In that case, the term “You” in this
    Agreement will refer to You and the employer collectively. If You change employers in the future and
    desire to Submit additional Submissions for the new employer, then You agree to sign a new Agreement
    and secure permission from the new employer before Submitting those Submissions.
  5. Licenses.
  • Copyright License. You grant Microsoft, and those who receive the Submission directly or
    indirectly from Microsoft, a perpetual, worldwide, non-exclusive, royalty-free, irrevocable license in the
    Submission to reproduce, prepare derivative works of, publicly display, publicly perform, and distribute
    the Submission and such derivative works, and to sublicense any or all of the foregoing rights to third
    parties.
  • Patent License. You grant Microsoft, and those who receive the Submission directly or
    indirectly from Microsoft, a perpetual, worldwide, non-exclusive, royalty-free, irrevocable license under
    Your patent claims that are necessarily infringed by the Submission or the combination of the
    Submission with the Project to which it was Submitted to make, have made, use, offer to sell, sell and
    import or otherwise dispose of the Submission alone or with the Project.
  • Other Rights Reserved. Each party reserves all rights not expressly granted in this Agreement.
    No additional licenses or rights whatsoever (including, without limitation, any implied licenses) are
    granted by implication, exhaustion, estoppel or otherwise.
  1. Representations and Warranties. You represent that You are legally entitled to grant the above
    licenses. You represent that each of Your Submissions is entirely Your original work (except as You may
    have disclosed under Section 3). You represent that You have secured permission from Your employer to
    make the Submission in cases where Your Submission is made in the course of Your work for Your
    employer or Your employer has intellectual property rights in Your Submission by contract or applicable
    law. If You are signing this Agreement on behalf of Your employer, You represent and warrant that You
    have the necessary authority to bind the listed employer to the obligations contained in this Agreement.
    You are not expected to provide support for Your Submission, unless You choose to do so. UNLESS
    REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING, AND EXCEPT FOR THE WARRANTIES
    EXPRESSLY STATED IN SECTIONS 3, 4, AND 6, THE SUBMISSION PROVIDED UNDER THIS AGREEMENT IS
    PROVIDED WITHOUT WARRANTY OF ANY KIND, INCLUDING, BUT NOT LIMITED TO, ANY WARRANTY OF
    NONINFRINGEMENT, MERCHANTABILITY, OR FITNESS FOR A PARTICULAR PURPOSE.
  2. Notice to Microsoft. You agree to notify Microsoft in writing of any facts or circumstances of which
    You later become aware that would make Your representations in this Agreement inaccurate in any
    respect.
  3. Information about Submissions. You agree that contributions to Projects and information about
    contributions may be maintained indefinitely and disclosed publicly, including Your name and other
    information that You submit with Your Submission.
  4. Governing Law/Jurisdiction. This Agreement is governed by the laws of the State of Washington, and
    the parties consent to exclusive jurisdiction and venue in the federal courts sitting in King County,
    Washington, unless no federal subject matter jurisdiction exists, in which case the parties consent to
    exclusive jurisdiction and venue in the Superior Court of King County, Washington. The parties waive all
    defenses of lack of personal jurisdiction and forum non-conveniens.
  5. Entire Agreement/Assignment. This Agreement is the entire agreement between the parties, and
    supersedes any and all prior agreements, understandings or communications, written or oral, between
    the parties relating to the subject matter hereof. This Agreement may be assigned by Microsoft.

@microsoft-github-policy-service agree company="Legit Security"

@edena-legit
Copy link

@melotic

var entry = package.GetEntry($"{name.Replace('-', '_')}-{version}.dist-info/METADATA");
// Store the .whl file on the disk temporarily
var tempFilePath = Path.GetTempFileName();
await using (var fileStreamWrite =
Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Is this needed? I know these are temp files, but depending on how big the file can be, couldn't writing to disk cause errors for systems that are particularly low on disk space?

Copy link
Author

@asaf92-legit asaf92-legit Nov 5, 2023

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

We encountered the opposite problem very often. We had enough disk space, but got OOM when buffering (and caching) large .whl files into memory in the HTTP SendAsync part.

Perhaps we can make this behavior configurable, so that consumers will be able to select whether to use disk storage for the downloads?

Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Maybe we can start by adding some telemetry on the size of some wheels. I am a bit worried that we would eat up all the disk space downloading the wheels to disk, as technically we'd download them twice in a given CI build (pip install + running CD).

A slider or a configurable limit on either:

  1. The size of the given wheel (only write wheels smaller than x bytes to disk)
  2. Total disk space used downloading wheels

sounds like the best options.

Copy link
Author

@asaf92-legit asaf92-legit Dec 4, 2023

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

How about we have 2 options:

  • Store wheels in memory (Default)
  • Store wheels on the disk

Would that be fine?

It would leave current behavior unchanged, but give an option to use disk space instead of process memory for those who want it. A more fine-grained control like you suggested can be added at a later point if necessary.

We can set this with an environment variable (or maybe even an Options<T>)


if (!response.IsSuccessStatusCode)
return (await this.cachedDependencies.GetOrCreateAsync(key, FetchDependencies)).ToList();
Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

nit: .ToList might be redundant since the task result is already a list and it eventually gets converted to dictionary in pythonresolver.

@Omotola Omotola requested a review from cobya November 3, 2023 02:23
{
dependencies.Add(new PipDependencySpecification(deps, true));
}
File.Delete(tempFilePath);
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

what if this fails?

The detector can run in parallel and potentially cause lockups.

Copy link
Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

This code uses a different temporary path every time (GetTempFileName), so there won't be issues

@melotic
Copy link
Member

melotic commented Nov 5, 2023

Thanks for the contribution! Would you happen to have some memory benchmarks on this PR? Curious to see the improvement.

@cobya cobya added status:waiting-on-response Waiting on a response/more information from the user type:refactor Refactoring or improving of existing code detector:pip The pip detector labels Nov 30, 2023
@asaf92-legit
Copy link
Author

Thanks for the contribution! Would you happen to have some memory benchmarks on this PR? Curious to see the improvement.

Hi @melotic, sorry for not replying earlier.

I ran memory profilers and saw that the peak memory does not increase with this implementation. I'm not sure a classic benchmark would be useful here, as this PR addresses the peak memory usage, but I can demonstrate this manually.

I can add code that runs GC and logs the memory in-use immediately after. Would that be OK?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
detector:pip The pip detector status:waiting-on-response Waiting on a response/more information from the user type:refactor Refactoring or improving of existing code
Projects
None yet
Development

Successfully merging this pull request may close these issues.

5 participants