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Add get_uri method to term.py class #167

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@IshaGupta18 IshaGupta18 commented May 2, 2022

Solving #117, added a method get_uri() to term.py class.

@althonos what's your take on this?

if prefix in ontology.metadata.idspaces:
return "{}{}".format(ontology.metadata.idspaces[prefix][0], local)
else:
return "http://purl.obolibrary.org/obo/{}_{}".format(prefix, local)
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probably not smart to assume OBO URIs for any old ontology. This should raise an exception like a KeyError if there's no idspace defined for the prefix.

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@althonos althonos Jun 9, 2022

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@cthoyt : Not necessarily, because the prefix could also originate from an import. In that case, you'd have to check the ontology attribute of imported prefixes.

@althonos althonos force-pushed the master branch 2 times, most recently from a690871 to 1e55509 Compare June 18, 2022 14:51
@althonos althonos force-pushed the master branch 2 times, most recently from 481b91f to 7eda5d0 Compare September 14, 2024 15:09
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3 participants