Added cortical thickness error estimation #67

	name: Python CI

	on:
	push:
	branches:
	- '**'
	pull_request:
	branches: [ main, dev ]

	jobs:
	build:

	runs-on: ${{ matrix.os }}
	strategy:
	fail-fast: false
	matrix:
	os: [ ubuntu-latest, windows-latest, macos-latest ]
	python-version: [ 3.9, "3.10", "3.11", "3.12" ]

	steps:
	- uses: actions/checkout@v4
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install flake8 pytest codecov pytest-cov wheel
	pip install -r requirements.txt
	- name: Lint with flake8
	run: \|
	# stop the build if there are Python syntax errors or undefined names
	flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
	# exit-zero treats all errors as warnings.
	flake8 . --count --exit-zero --max-complexity=10 --max-line-length=80 --statistics
	- name: Test with pytest
	run: \|
	pytest --cov-report=xml --cov=qlayers
	- name: Upload coverage reports to Codecov
	uses: codecov/codecov-action@v3
	env:
	CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

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