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@SciLifeLab

Science For Life Laboratory

Science for Life Laboratory (SciLifeLab) is a national center for molecular biosciences with focus on health and environmental research

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  1. genologics genologics Public

    Forked from pekrau/genologics

    Python interface to the GenoLogics LIMS server via its REST API.

    Python 29 43

  2. NouGAT NouGAT Public

    Forked from vezzi/NouGAT

    NouGAT is a pipeline that automates de novo assembly project tasks, generating a first draft assembly.

    Python 5 6

  3. TIDDIT TIDDIT Public

    TIDDIT - structural variant calling

    Cython 73 14

  4. courses courses Public

    Forked from henrythemes/jekyll-bootstrap-theme

    Course homepages for some of the courses given at SciLifeLab

    HTML 21 33

Repositories

Showing 10 of 46 repositories
  • TIDDIT Public

    TIDDIT - structural variant calling

    SciLifeLab/TIDDIT’s past year of commit activity
    Cython 73 14 6 0 Updated Nov 19, 2024
  • umi-transfer Public

    A Rust software to extract Unique Molecular Identifiers in FastQ files and embedd them into the ID of the corresponding reads.

    SciLifeLab/umi-transfer’s past year of commit activity
    Rust 5 MIT 2 1 0 Updated Nov 9, 2024
  • genologics Public Forked from pekrau/genologics

    Python interface to the GenoLogics LIMS server via its REST API.

    SciLifeLab/genologics’s past year of commit activity
    Python 29 MIT 53 9 0 Updated Aug 26, 2024
  • facs Public

    Fast and Accurate Classification of Sequences using Bloom filters

    SciLifeLab/facs’s past year of commit activity
    Jupyter Notebook 16 9 8 0 Updated Apr 19, 2023
  • OrderPortal Public Forked from ScilifelabDataCentre/OrderPortal

    A portal for orders (a.k.a. requests, project applications) to a SciLifeLab facility from its users.

    SciLifeLab/OrderPortal’s past year of commit activity
    Python 1 MIT 12 0 0 Updated Oct 18, 2022
  • standalone_scripts-1 Public archive Forked from NationalGenomicsInfrastructure/standalone_scripts

    Repository to store standalone scripts that do not belong to any bigger package or repository

    SciLifeLab/standalone_scripts-1’s past year of commit activity
    Python 0 MIT 23 0 0 Updated Jun 20, 2022
  • percolator Public Forked from percolator/percolator

    Semi-supervised learning for peptide identification from shotgun proteomics datasets

    SciLifeLab/percolator’s past year of commit activity
    C++ 0 36 0 0 Updated Jan 5, 2021
  • coronastatus Public Forked from BustByte/coronastatus

    Open source webapp that let people report their health status to get overview of COVID-19 🇳🇴🇳🇱🇸🇰🇲🇽🇮🇹🇮🇳🇵🇭🇸🇪🇩🇰🇹🇷🇧🇪

    SciLifeLab/coronastatus’s past year of commit activity
    HTML 0 MIT 92 1 0 Updated Mar 28, 2020
  • scilifelab Public archive Forked from b97pla/scilifelab

    Misc code snippets for Science For Life Laboratory

    SciLifeLab/scilifelab’s past year of commit activity
    Python 5 MIT 25 10 0 Updated Jan 30, 2020
  • Sarek Public archive Forked from nf-core/sarek

    Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

    SciLifeLab/Sarek’s past year of commit activity
    Nextflow 133 MIT 419 0 0 Updated Jan 27, 2020
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