The BRC Pipeline scripts are being released for processing magnetic resonance imaging (MRI) data. This processing pipeline could be applied to different modalities such as T1w/T2w MRI, diffusion MRI, and functional MRI datasets. Also, it can be used for functional connectivity and network analysis.
The instruction of step by step installation is available at the Release Notes, Installation, and Usage document for the current release.
Before contacting us, please try the following:
- The wiki has tutorials on how to install and run the pipeline for different modalities.
- Common issues are described in the FAQ If that doesn't work, you can get in touch with us!
Each version of the pipeline has its own DOI. The above shiny badge shows the DOI of the last version. However, by clicking on this badge, you can find different DOIs of different versions. You can cite all versions by using the DOI 10.5281/zenodo.3624973. This DOI represents all versions, and will always resolve to the latest one.
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Cite as:
Ali-Reza Mohammadi-Nejad, Stefan Pszczolkowski, Dorothee Auer, Stamatios Sotiropoulos. Multi-modal neuroimaging pipelines for data preprocessing. Zenodo. http://doi.org/10.5281/zenodo.3624973
- See the versions history page for details on releases.