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@RTXteam

Development team for the RTX biomedical reasoning tool

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  1. RTX-KG2 RTX-KG2 Public

    Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    Python 39 8

  2. RTX RTX Public

    Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    Python 33 21

  3. PloverDB PloverDB Public

    An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    Python 1 4

  4. NL2TRAPI NL2TRAPI Public

    A prototype investigation of converting natural language questions to the TRAPI format

    Python 1 1

  5. xDTD_training_pipeline xDTD_training_pipeline Public

    This repo is created for hosting a pipeline for automatically training xDTD model.

    Python 1 3

  6. umls2rdf umls2rdf Public

    Forked from ncbo/umls2rdf

    These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python

Repositories

Showing 10 of 18 repositories
  • PloverDB Public

    An in-memory database service for hosting and serving biomedical knowledge graphs as TRAPI APIs

    RTXteam/PloverDB’s past year of commit activity
    Python 1 MIT 4 3 0 Updated Dec 20, 2024
  • RTX Public

    Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

    RTXteam/RTX’s past year of commit activity
    Python 33 MIT 21 111 1 Updated Dec 19, 2024
  • RTX-KG2 Public

    Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)

    RTXteam/RTX-KG2’s past year of commit activity
    Python 39 MIT 8 193 (6 issues need help) 0 Updated Dec 19, 2024
  • xDTD_training_pipeline Public

    This repo is created for hosting a pipeline for automatically training xDTD model.

    RTXteam/xDTD_training_pipeline’s past year of commit activity
    Python 1 MIT 3 0 0 Updated Dec 3, 2024
  • xCRG_training_pipeline Public
    RTXteam/xCRG_training_pipeline’s past year of commit activity
    0 0 0 0 Updated Aug 26, 2024
  • NL2TRAPI Public

    A prototype investigation of converting natural language questions to the TRAPI format

    RTXteam/NL2TRAPI’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Feb 23, 2024
  • DrugConflator Public

    Tool to find the "essential drug" corresponding to any biolink:ChemicalEntity

    RTXteam/DrugConflator’s past year of commit activity
    Python 0 0 0 0 Updated Jul 5, 2023
  • ScoringAnalysis Public

    Code to parse ARS results dump and extract ARA scores

    RTXteam/ScoringAnalysis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 12, 2023
  • translator-developer-documentation Public Forked from NCATSTranslator/TranslatorTechnicalDocumentation

    Official Developer Documentation repository for the Biomedical Data Translator: https://translator-developer-documentation.readthedocs.io/en/latest/

    RTXteam/translator-developer-documentation’s past year of commit activity
    0 CC0-1.0 17 0 0 Updated Mar 29, 2023
  • result-merging Public

    TRAPI Response merging

    RTXteam/result-merging’s past year of commit activity
    Python 0 0 0 0 Updated Aug 2, 2022
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