Update constraints.txt

constraints.txt

@@ -7,7 +7,7 @@ appdirs==1.4.4
 argon2-cffi==23.1.0
 argon2-cffi-bindings==21.2.0
 arrow==1.3.0
-asttokens==2.4.1
+asttokens==3.0.0
 async-lru==2.0.4
 attrs==24.2.0
 babel==2.16.0
@@ -30,19 +30,19 @@ click-default-group==1.2.4
 colorama==0.4.6
 comm==0.2.2
 commonmark==0.9.1
-contourpy==1.3.0
-cryptography==43.0.3
+contourpy==1.3.1
+cryptography==44.0.0
 curies==0.7.10
 cycler==0.12.1
 dacite==1.8.1
 daff==1.3.46
 dataclasses==0.6
 dataclasses-json==0.6.7
 dataclasses-jsonschema==2.16.0
-debugpy==1.8.7
+debugpy==1.8.9
 decorator==5.1.1
 defusedxml==0.7.1
-Deprecated==1.2.14
+Deprecated==1.2.15
 deprecation==2.1.0
 diskcache==5.6.3
 distlib==0.3.9
@@ -54,29 +54,29 @@ EditorConfig==0.12.4
 et_xmlfile==2.0.0
 eutils==0.6.0
 executing==2.1.0
-fastjsonschema==2.20.0
+fastjsonschema==2.21.1
 fastobo==0.12.3
 filelock==3.16.1
-fonttools==4.54.1
+fonttools==4.55.0
 fqdn==1.5.1
 funowl==0.2.3
 ghp-import==2.1.0
 google==3.0.0
-google-api-core==2.22.0
-google-api-python-client==2.151.0
-google-auth==2.35.0
+google-api-core==2.23.0
+google-api-python-client==2.154.0
+google-auth==2.36.0
 google-auth-httplib2==0.2.0
 google-auth-oauthlib==1.2.1
-googleapis-common-protos==1.65.0
+googleapis-common-protos==1.66.0
 graphviz==0.20.3
 greenlet==3.1.1
 gspread==6.1.4
 gspread-formatting==1.2.0
 h11==0.14.0
 hbreader==0.9.1
-httpcore==1.0.6
+httpcore==1.0.7
 httplib2==0.22.0
-httpx==0.27.2
+httpx==0.28.0
 idna==3.10
 ijson==3.3.0
 imagesize==1.4.1
@@ -85,30 +85,30 @@ importlib_resources==6.4.5
 inflection==0.5.1
 iniconfig==2.0.0
 ipykernel==6.29.5
-ipython==8.29.0
+ipython==8.30.0
 ipywidgets==8.1.5
 isodate==0.7.2
 isoduration==20.11.0
 jaraco.classes==3.4.0
 jaraco.context==6.0.1
 jaraco.functools==4.1.0
-jedi==0.19.1
+jedi==0.19.2
 jeepney==0.8.0
 Jinja2==3.1.4
 jinjanator==24.4.0
 jinjanator-plugins==24.2.0
-jiter==0.7.0
+jiter==0.8.0
 jsbeautifier==1.15.1
 jsobject==0.10.2
 json-flattener==0.1.9
-json5==0.9.25
+json5==0.10.0
 jsonasobj==1.3.1
 jsonasobj2==1.0.4
 jsonlines==4.0.0
 jsonpatch==1.33
 jsonpath-ng==1.7.0
 jsonpath-rw==1.4.0
-jsonpickle==3.3.0
+jsonpickle==4.0.0
 jsonpointer==3.0.0
 jsonschema==4.23.0
 jsonschema-specifications==2024.10.1
@@ -122,7 +122,7 @@ jupyter_client==8.6.3
 jupyter_core==5.7.2
 jupyter_server==2.14.2
 jupyter_server_terminals==0.5.3
-jupyterlab==4.2.5
+jupyterlab==4.2.6
 jupyterlab_pygments==0.3.0
 jupyterlab_server==2.27.3
 jupyterlab_widgets==3.0.13
@@ -143,30 +143,30 @@ Markdown==3.7
 markdown-it-py==3.0.0
 MarkupSafe==3.0.2
 marshmallow==3.23.1
-matplotlib==3.9.2
+matplotlib==3.9.3
 matplotlib-inline==0.1.7
 matplotlib-venn==1.1.1
 mdurl==0.1.2
 mergedeep==1.3.4
 mistune==3.0.2
 mkdocs==1.6.1
 mkdocs-get-deps==0.2.0
-mkdocs-material==9.5.43
+mkdocs-material==9.5.47
 mkdocs-material-extensions==1.3.1
 mkdocs-mermaid2-plugin==1.2.1
 mkdocs-table-reader-plugin==3.1.0
 more-click==0.1.2
 more-itertools==10.5.0
 mypy==1.13.0
 mypy-extensions==1.0.0
-nbclient==0.10.0
+nbclient==0.10.1
 nbconvert==7.16.4
 nbformat==5.10.4
 ndex2==3.9.0
-neo4j==5.26.0
+neo4j==5.27.0
 nest-asyncio==1.6.0
 networkx==3.4.2
-nh3==0.2.18
+nh3==0.2.19
 notebook==7.2.2
 notebook_shim==0.2.4
 numpy==1.26.4
@@ -177,11 +177,11 @@ ontobio==2.9.10
 ontodev-cogs==0.3.3
 ontodev-gizmos==0.3.2
 ontoportal-client==0.0.4
-openai==1.53.1
+openai==1.55.3
 openpyxl==3.1.5
 ordered-set==4.1.0
 overrides==7.7.0
-packaging==24.1
+packaging==24.2
 paginate==0.5.7
 pandas==2.2.3
 pandocfilters==1.5.1
@@ -191,7 +191,7 @@ parso==0.8.4
 pathspec==0.12.1
 pexpect==4.9.0
 pillow==11.0.0
-pkginfo==1.10.0
+pkginfo==1.11.2
 platformdirs==4.3.6
 plotly==5.24.1
 pluggy==1.5.0
@@ -203,21 +203,21 @@ prometheus_client==0.21.0
 prompt_toolkit==3.0.48
 pronto==2.5.8
 proto-plus==1.25.0
-protobuf==5.28.3
+protobuf==5.29.0
 psutil==6.1.0
 ptyprocess==0.7.0
 pure_eval==0.2.3
 pyarrow==15.0.2
 pyasn1==0.6.1
 pyasn1_modules==0.4.1
 pycparser==2.22
-pydantic==2.9.2
-pydantic_core==2.23.4
+pydantic==2.10.2
+pydantic_core==2.27.1
 pydotplus==2.0.2
-PyGithub==2.4.0
+PyGithub==2.5.0
 Pygments==2.18.0
 PyJSG==0.11.10
-PyJWT==2.9.0
+PyJWT==2.10.1
 pymdown-extensions==10.12
 PyNaCl==1.5.0
 pyparsing==2.4.7
@@ -226,8 +226,8 @@ PyShEx==0.8.1
 PyShExC==0.9.1
 pysolr==3.10.0
 pyspellchecker==0.8.1
-pystow==0.5.6
-pytest==8.3.3
+pystow==0.6.1
+pytest==8.3.4
 pytest-logging==2015.11.4
 python-dateutil==2.9.0.post0
 python-dotenv==1.0.1
@@ -245,7 +245,7 @@ rdflib-shim==1.0.3
 readme_renderer==44.0
 recommonmark==0.7.1
 referencing==0.35.1
-regex==2024.9.11
+regex==2024.11.6
 requests==2.32.3
 requests-cache==1.2.1
 requests-oauthlib==2.0.0
@@ -255,7 +255,7 @@ rfc3986==2.0.0
 rfc3986-validator==0.1.1
 rfc3987==1.3.8
 rich==13.9.4
-rpds-py==0.20.1
+rpds-py==0.21.0
 rsa==4.9
 ruamel.yaml==0.18.6
 ruamel.yaml.clib==0.2.12
@@ -285,8 +285,8 @@ SQLAlchemy==2.0.36
 SQLAlchemy-Utils==0.38.3
 sqlite-fts4==1.0.3
 sqlite-migrate==0.1b0
-sqlite-utils==3.37
-sssom==0.4.12
+sqlite-utils==3.38
+sssom==0.4.13
 sssom-schema==1.0.0
 stack-data==0.6.3
 stringcase==1.2.0
@@ -296,12 +296,12 @@ termcolor==2.5.0
 terminado==0.18.1
 terminaltables==3.1.10
 tinycss2==1.4.0
-tornado==6.4.1
+tornado==6.4.2
 tox==4.23.2
-tqdm==4.66.6
+tqdm==4.67.1
 traitlets==5.14.3
 tsvalid==0.0.3
-twine==5.1.1
+twine==6.0.1
 types-python-dateutil==2.9.0.20241003
 typing-inspect==0.9.0
 typing_extensions==4.12.2
@@ -312,15 +312,15 @@ uritemplate==4.1.1
 url-normalize==1.4.3
 urllib3==2.2.3
 validators==0.20.0
-virtualenv==20.27.1
+virtualenv==20.28.0
 watchdog==6.0.0
 wcwidth==0.2.13
-webcolors==24.8.0
+webcolors==24.11.1
 webencodings==0.5.1
 websocket-client==1.8.0
 wheel==0.42.0
 widgetsnbextension==4.0.13
-wrapt==1.16.0
+wrapt==1.17.0
 xmltodict==0.13.0
 yamldown==0.1.8
-zipp==3.20.2
+zipp==3.21.0