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This is an initial implementation of representing a protein via "fields." The general idea is that each point on a grid (which generally intersects with the protein volume) is assigned a set of "fields" which express different aspects of the biophysics. Currently supported are
electrostatic
(using just the side-chain charges) andsteric
(which holds van der Waals interactions via a Lennard-Jones potential).I'll probably leave this open for a bit because it might make sense to play with this before merging it.