Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

typos and consistency #16

Open
wants to merge 1 commit into
base: main
Choose a base branch
from
Open
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
14 changes: 7 additions & 7 deletions dss.qmd
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ title: "Translational Data Science & Software"
toc: true
---

The Translational Data Science & Software group collaborate with and support both research and clinical staff with applying effective data science and analysis into research and clinical care. Our goal is to create a feedback loop to foster a learning healthcare system.
The Translational Data Science & Software group collaborates with and supports both research and clinical staff to integrate effective data science and analysis into research and clinical care. Our goal is to create a feedback loop to foster a learning healthcare system.

We develop data products, including web applications, data analysis tools, process automation, and scientific software, to enable effective data use and integration into research and clinical care. We also collaborate with our clinical and research partners to develop statistical/ML/NLP models, data analyses, and data-driven dashboards and visualizations using real-world healthcare and laboratory-generated data.

Expand All @@ -20,11 +20,11 @@ Our team supports clinical data science at Fred Hutch by analyzing real-world da

### Connect with us

- Fred Hutch patient data access and analysis support can be requested on [Fred Hutch CenterNet](https://centernet.fredhutch.org/u/data-science-lab/patient-data.html).
- E-mail us about partnering on other clinical data science projects: `[email protected]`.
- Schedule a 20-minute[Data House Call](programs/dhc.qmd)
+ [Clinical data access](https://calendly.com/data-house-calls/clinical-data) to discuss how we can support you in accessing and using Fred Hutch patient data for research
+ [Data wranging and visualization](https://calendly.com/data-house-calls/analysis-viz)

Fred Hutch patient data access for research and analysis support can be requested on [Fred Hutch CenterNet](https://centernet.fredhutch.org/u/data-science-lab/patient-data.html). E-mail us about partnering on other clinical data science projects: `[email protected]` or connect with us through our [Data House Calls](programs/dhc.qmd) program.


- [Clinical data access](https://calendly.com/data-house-calls/clinical-data): to discuss how we can support you in accessing and using Fred Hutch patient data for research

## Research Informatics

Expand Down Expand Up @@ -56,4 +56,4 @@ The Human Computer Interaction (HCI) team develops and enhances open-source scie

### Connect with us

Schedule a discussion on your code or software questions via a [Code and Software, Data House Call type](https://calendly.com/data-house-calls/code).
- [Code and Software, Data House Call](https://calendly.com/data-house-calls/code): for code or software questions and support
2 changes: 1 addition & 1 deletion gov.qmd
Original file line number Diff line number Diff line change
Expand Up @@ -61,5 +61,5 @@ Email questions about data governance generally to [[email protected]
- [Clinical Patient Data Access](https://calendly.com/data-house-calls/clinical-data) House Call: questions about Fred Hutch adult oncology clinical patient data access for research and it's oversight.
- [Data Sharing, Study Planning and Grants](https://calendly.com/data-house-calls/sharing): questions about data sharing and planning.

For a full description of data house calls, see the [Data House Calls](programs/dhc) program page.


6 changes: 3 additions & 3 deletions index.qmd
Original file line number Diff line number Diff line change
Expand Up @@ -24,10 +24,10 @@ The mission of our group is to ensure an effective data ecosystem at Fred Hutch
“Culture eats strategy for breakfast.” In our group we believe that a strong, inclusive culture is essential to achieving our mission. Our core values and community event guidelines reflect this commitment, fostering an environment where respect, curiosity, and collaboration drive innovation. Through shared principles and open participation, we create a space where every voice contributes to advancing healthcare and research.

### Core Values
Read about [our Core Values](pages/values.qmd) and how we foster an innovative and supportive data science community in our team, at Fred Hutch and beyond.
Read about our [Core Values](pages/values.qmd) and how we foster an innovative and supportive data science community in our team, at Fred Hutch and beyond.

### Community Events Participation Guidelines
Our community events are safe spaces to learn, teach, and ask questions of each other. In order to ensure our events are welcome to all, we provide [Participation Guidelines](pages/participation.qmd).
### Code of Conduct
Our community events are safe spaces to learn, teach, and ask questions of each other. In order to ensure our events are welcome to all, we provide [participation guidelines](pages/participation.qmd).

![](img/dasl-eco-fade-web.png)

Expand Down
34 changes: 9 additions & 25 deletions programs/dhc.qmd
Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ Fred Hutch and UW Medicine staff can now schedule on-call Data House Calls here

### Translational Data

Clinical and Research Data Solutions (CARDS) will become the foundational translational data infrastructure of the recently merged Fred Hutch Cancer Center. This DHC is for more information about the current status of translational data supports, CARDS development and associated efforts that are upcoming related to patient data governance, infrastructure and data science capabilities.
Clinical and Research Data Solutions (CARDS) will become the foundational translational data infrastructure of the recently merged Fred Hutch Cancer Center. This [Data House Call](https://calendly.com/data-house-calls/cards) is for more information about the current status of translational data supports, CARDS development and associated efforts that are upcoming related to patient data governance, infrastructure and data science capabilities.

::: {.callout-tip appearance="simple"}
Schedule this [Data House Call](https://calendly.com/data-house-calls/cards).
Expand All @@ -45,7 +45,7 @@ Schedule this [Data House Call](https://calendly.com/data-house-calls/misc).
:::
### Data Partnerships

Use this event to schedule a Data House Call if you are interested in a Data Science Partnership with an external partner. Some examples of areas you might be interested in exploring:
Use this [Data House Call](https://calendly.com/data-house-calls/partnerships) if you are interested in a Data Science Partnership with an external partner. Some examples of areas you might be interested in exploring:

- You have a gap in data science and/or technology need that would benefit from a known (or unknown) partner.
- You have been contacted by a data science and/or technology company that is interested in partnering and could use a sounding board for if/how to proceed.
Expand All @@ -60,7 +60,7 @@ Schedule this [Data House Call](https://calendly.com/data-house-calls/partnershi
:::
### Data Policy and AI

Use this [Data House Call](https://calendly.com/data-house-calls/data-policy) for questionsabout data policy, data protection and AI use cases.
Use this [Data House Call](https://calendly.com/data-house-calls/data-policy) for questions about data policy, data protection and AI use cases.

- Inquire about the status of our AI interim policy and guidance for use of AI with patient and research data,
- Ask questions about data use agreements, IRB protocols, and other data privacy or security concerns,
Expand Down Expand Up @@ -92,23 +92,17 @@ Schedule this [Data House Call](https://calendly.com/data-house-calls/sharing).
:::
### Clinical Data Access

Use this Data House Call to discuss questions about Fred Hutch adult oncology clinical patient data access, especially for research and it's oversight.
Use this [Data House Call](https://calendly.com/data-house-calls/clinical-data) to discuss questions about Fred Hutch adult oncology clinical patient data access, especially for research and it's oversight.

Curious about pathways to get access to Fred Hutch clinical patient data?

Have questions about IRB protocols and patient data for research options?

Want to learn about some of the ongoing work with DaSL, IT, Compliance, OTR and others that will be supporting the clinical data program at Fred Hutch?

This DHC is the right one.
Curious about pathways to get access to Fred Hutch clinical patient data? Have questions about IRB protocols and patient data for research options? Want to learn about some of the ongoing work with DaSL, IT, Compliance, OTR and others that will be supporting the clinical data program at Fred Hutch? This DHC is the right one.

::: {.callout-tip appearance="simple"}
Schedule this [Data House Call](https://calendly.com/data-house-calls/clinical-data).
:::
### Research Data Management


Use this event to schedule a Data House Call for questions about research data management, infrastructure or tools.
Use this [Data House Call](https://calendly.com/data-house-calls/management) for questions about research data management, infrastructure or tools.


- Developing lab or group data management schemes that support research, leverage FHCC infrastructure and are cost effective
Expand All @@ -127,7 +121,7 @@ Or other questions you have that you feel might relate to this topic!
Schedule this [Data House Call](https://calendly.com/data-house-calls/management).
:::
### Code and Software: R, Python and Beyond
Use this event to schedule a Data House Call for questions about learning, writing and managing code and research software.
Use this [Data House Call](https://calendly.com/data-house-calls/code) for questions about learning, writing and managing code and research software.

- R
- Python
Expand All @@ -142,7 +136,7 @@ Schedule this [Data House Call](https://calendly.com/data-house-calls/code).
:::
### Research Computing: Running and Scaling your Analyses

Use this event to schedule a Data House Call for questions about how to run your code or analysis more effectively and scale up your work via:
Use this [Data House Call](https://calendly.com/data-house-calls/computing) for questions about how to run your code or analysis more effectively and scale up your work via:

- Using our computing cluster
- Writing and running scientific workflows
Expand All @@ -160,21 +154,11 @@ Or other questions you have that you feel might relate to this topic!  
::: {.callout-tip appearance="simple"}
Schedule this [Data House Call](https://calendly.com/data-house-calls/computing).
:::
### Data Wrangling and Visualization

Use this event to schedule a Data House Call if you are looking for a sounding board about strategies for data handling, tidy data, and data visualization, such as how to make engaging, clear, or even interactive figures.

Or other questions you have that you feel might relate to this topic.


::: {.callout-tip appearance="simple"}
Schedule this [Data House Call](https://calendly.com/data-house-calls/analysis-viz).
:::


### DaSL Supported Resources

Use this event to schedule a Data House Call for questions about DaSL supported resources such as:
Use this [Data House Call](https://calendly.com/data-house-calls/resources) for questions about DaSL supported resources such as:

- PROOF
- cBioPortal
Expand Down
6 changes: 3 additions & 3 deletions strategy.qmd
Original file line number Diff line number Diff line change
Expand Up @@ -47,9 +47,9 @@ If you'd like to let us know what issues you’re seeing, desired data capabilit
### Data House Calls
You can connect with us through our [Data House Calls](programs/dhc.qmd) and these specific Data House Call types to schedule a quick, 20 min discussion with us.

- For high level or broad data related topics, please schedule a [General Data House Call](https://calendly.com/data-house-calls/misc)
- For a translational data and technology oriented discussion, please schedule a [Translational Data House Call ](https://calendly.com/data-house-calls/cards).
- For information about Data Science Partnerships, schedule a [Partnerships Data House Call](https://calendly.com/data-house-calls/partnerships) with Brian Bot (Director, Data Science Partnerships).
- [General Data House Call](https://calendly.com/data-house-calls/misc): For high level or broad data related topics
- [Translational Data House Call ](https://calendly.com/data-house-calls/cards): For a translational data and technology oriented discussion, please schedule a
- [Partnerships Data House Call](https://calendly.com/data-house-calls/partnerships): For information about Data Science Partnerships, schedule a with Brian Bot (Director, Data Science Partnerships)

### Data Noon Community Calls

Expand Down
Loading