review: psychiatric and mental disorders

[pnrobinson]

psychosocial short stature

This should not be classified as a developmental disorder, even though logically it is that to a certain extent. There should be some subhierarchy of child abuse/neglect-related diseases. I did not see any of these terms at first glance

Here is a review article
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4288037/

[cmungall]

Would this proposed parent be a top level term, or under mental/psychiatric? the whole of mental/psych diseases in mondo and all other ontologies/vocabs I have seen are not satisfactory, Nicole, can you create a gh project for these so we can organize tickets. Who can we bring in to help with this?

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On 28 Nov 2018, at 12:05, Peter Robinson wrote: This should not be classified as a developmental disorder, even though logically it is that to a certain extent. There should be some subhierarchy of child abuse/neglect-related diseases. I did not see any of these terms at first glance Here is a review article https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4288037/ -- You are receiving this because you are subscribed to this thread. Reply to this email directly or view it on GitHub: #535

[nicolevasilevsky]

related to #130

[nicolevasilevsky]

From Peter:
The two classifications of mental disorder are debatable.

https://www.ebi.ac.uk/ols/ontologies/mondo/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FMONDO_0005084

It is not the case that every mental disorder is a psychiatric disorder, and this link is wrong.

Logically it is the case that every mental disorder is a brain disorder, but there are many cases of mental disorder where it is not possible to identify the "cause" in the brain, and so I am not sure this is the best primary classification. I do not have an easy answer right now, but this needs TLC.

(ticket #527)

[nicolevasilevsky]

Other related tickets:

• review: psychiatric and mental disorders #130
• Psychiatric and mental disorders - align with wikipedia/DSM5 #2423

[nicolevasilevsky]

Should revise the psych hierarchy based on DSM-5
https://www.psychiatry.org/psychiatrists/practice/dsm

classify diseases based on chapter headings and the diseases that are mentioned in each chapter.

[nicolevasilevsky]

Need term
psychomotor disorder
https://my.clevelandclinic.org/health/diseases/21521-psychosomatic-disorder

[kanems]

UMLS lumps "psychiatric disorders" and "mental disorders" into one CUI (C0004936), which is in alignment with SNOMED CT
74732009, MeSH D001523, NCI C2893... and possibly other sources in UMLS that I am less familiar with.
I am not convinced this is correct, given the structure of Mondo's hierarchy under MONDO:0002025 psychiatric disorder, but I am not sure UMLS will split the CUI into two things when SNOMED CT lumps them. Just wanted to give you a heads up that MedGen will have to represent one of these concepts with a CN instead of a UMLS CUI.
If you have any other sources/insight from the DSM-5 alignment work discussed here that we could share with UMLS, perhaps we could eventually get these terms clarified and harmonized.