Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Unrelated identifiers clustered with tocilizumab #297

Open
amykglen opened this issue Oct 31, 2024 · 0 comments
Open

Unrelated identifiers clustered with tocilizumab #297

amykglen opened this issue Oct 31, 2024 · 0 comments

Comments

@amykglen
Copy link

amykglen commented Oct 31, 2024

@jaredroach brought an issue with naming of tocilizumab in RTX-KG2c to our attention and we traced it to the fact that the NodeNormalizer's cluster for tocilizumab includes a couple identifiers with names that seemingly have nothing to do with tocilizumab:

https://nodenorm.ci.transltr.io/get_normalized_nodes?curie=UNII:I031V2H011

"equivalent_identifiers": [
...
{
"identifier": "PUBCHEM.COMPOUND:10150081",
"label": "2-[(4-Ethynyl-2-Fluorophenyl)amino]-3,4-Difluoro-N-(2-Hydroxyethoxy)benzamide"
},
{
...
{
"identifier": "DRUGBANK:DB08208",
"label": "2-[(4-ETHYNYL-2-FLUOROPHENYL)AMINO]-3,4-DIFLUORO-N-(2-HYDROXYETHOXY)BENZAMIDE"
},

are these two identifiers mistakenly assigned to this cluster?

@amykglen amykglen changed the title Unrelated nodes clustered with tocilizumab Unrelated identifiers clustered with tocilizumab Oct 31, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant